Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013200.1 Corchorus olitorius cultivar O-4 contig13233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3005

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1245--1391
73
2.0
73
100
0
294
27
9
19
43
1.82
1544--1578
4
8.8
4
100
0
70
77
0
0
22
0.78
2056--2112
13
4.4
13
84
4
71
17
12
21
49
1.79
2056--2105
20
2.5
20
87
6
75
18
10
22
50
1.76
2279--2331
27
1.9
28
92
3
90
13
32
16
37
1.88
2344--2390
7
6.9
7
78
4
51
2
21
27
48
1.61
2344--2388
14
3.3
14
87
6
74
2
22
26
48
1.62
2346--2408
27
2.3
27
88
0
90
6
23
23
46
1.75

Tables:   1

The End!