Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013201.1 Corchorus olitorius cultivar O-4 contig13234, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27393

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6845--6900
23
2.4
23
90
0
85
28
14
19
37
1.91
21781--22080
148
2.0
148
100
0
600
33
19
14
32
1.92
27143--27225
4
20.2
4
74
16
64
26
2
3
67
1.19
27146--27232
23
3.9
22
78
17
81
26
3
3
66
1.23
27150--27232
33
2.5
33
82
11
89
27
3
2
66
1.21
27150--27223
9
8.9
9
81
15
63
27
2
2
67
1.17
27196--27232
16
2.4
15
86
8
56
27
5
0
67
1.12
27368--27393
1
26.0
1
100
0
52
100
0
0
0
0.00

Tables:   1

The End!