Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013208.1 Corchorus olitorius cultivar O-4 contig13241, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16549

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
610--799
67
2.8
68
84
11
255
42
13
6
37
1.70
651--799
65
2.2
67
92
4
248
42
14
6
36
1.71
875--913
5
8.4
5
97
2
57
43
0
12
43
1.42
2907--2959
26
2.0
26
96
0
97
22
30
1
45
1.63
3367--3431
32
2.0
32
93
0
112
30
16
13
38
1.88
6858--6890
2
16.5
2
100
0
66
51
0
0
48
1.00
11572--11633
31
2.0
31
96
0
115
29
20
6
43
1.77
11649--11830
93
1.9
98
84
7
248
34
14
2
48
1.56
12405--12474
31
2.3
31
100
0
140
21
20
22
35
1.96
13633--13680
2
24.0
2
83
8
62
45
2
2
50
1.25
15238--15265
14
2.0
14
100
0
56
28
21
21
28
1.99

Tables:   1

The End!