Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013218.1 Corchorus olitorius cultivar O-4 contig13251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40831

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
48
0
0
51
1.00
9123--9154
2
16.0
2
100
0
64
50
0
0
50
1.00
10866--10901
18
2.0
18
94
0
63
38
16
13
30
1.88
13342--13387
25
1.9
25
86
8
69
34
4
0
60
1.16
14818--14842
9
2.8
9
100
0
50
80
20
0
0
0.72
16282--16376
41
2.3
41
81
0
118
43
13
15
27
1.85
19288--19361
27
2.7
28
80
2
87
40
24
14
20
1.90
33027--33053
13
2.1
13
100
0
54
22
7
22
48
1.75
33278--33319
21
2.0
21
100
0
84
23
42
23
9
1.83
36310--36473
59
2.8
59
87
2
240
33
17
21
28
1.95
36513--36675
60
2.7
59
88
4
229
28
19
16
35
1.94
36540--36643
29
3.5
30
68
17
92
29
19
16
34
1.93
39882--39927
18
2.6
18
78
0
56
52
2
0
45
1.13

Tables:   1

The End!