Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013220.1 Corchorus olitorius cultivar O-4 contig13253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27100

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5303--5357
21
2.7
20
78
13
58
54
9
9
27
1.62
5712--5766
22
2.6
21
80
11
58
49
10
9
30
1.69
5756--5927
86
2.0
87
93
3
294
47
8
12
32
1.70
6464--6516
20
2.7
20
79
5
54
47
3
13
35
1.61
7429--7489
2
30.5
2
96
0
113
0
47
0
52
1.00
8748--8783
16
2.2
16
90
0
54
27
41
8
22
1.82
10585--10619
12
2.8
13
87
12
56
65
0
34
0
0.93
11477--11693
37
5.9
37
78
10
207
28
16
18
36
1.92
11478--11618
71
1.9
74
87
5
207
28
16
18
36
1.92
11482--11692
108
2.0
107
82
9
259
27
15
19
36
1.92
14386--14497
51
2.2
51
80
10
124
51
12
9
25
1.70
17356--17394
18
2.1
18
90
4
60
51
12
2
33
1.54

Tables:   1

The End!