Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013223.1 Corchorus olitorius cultivar O-4 contig13256, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33437

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
497--581
39
2.2
39
89
0
125
43
24
23
8
1.81
462--639
96
1.9
96
81
2
223
39
26
24
8
1.85
519--727
57
3.7
56
80
6
145
38
22
25
12
1.90
898--1081
48
3.6
48
77
17
181
44
21
18
15
1.86
907--1140
60
4.1
60
79
14
296
45
20
18
14
1.85
898--1140
108
2.2
108
90
1
380
45
20
18
15
1.85
2547--2572
2
13.0
2
100
0
52
50
0
0
50
1.00
8344--8368
2
12.5
2
100
0
50
48
0
0
52
1.00
25614--25651
19
2.0
20
94
5
69
23
0
21
55
1.44
26010--27152
331
3.5
329
82
4
1316
35
16
14
33
1.89
28445--28518
22
3.4
22
86
1
96
39
12
8
40
1.72
28437--28541
43
2.4
44
83
3
131
40
12
8
38
1.73
32159--32423
131
2.0
131
100
0
530
38
12
12
37
1.80

Tables:   1

The End!