Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013238.1 Corchorus olitorius cultivar O-4 contig13271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17813

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3159--3194
18
2.1
18
89
5
56
38
8
8
44
1.65
4404--4451
21
2.3
21
85
0
60
10
29
50
10
1.70
7349--7421
31
2.3
32
83
2
103
32
28
17
20
1.96
9269--9307
19
2.1
19
90
0
60
58
0
25
15
1.37
9679--9874
14
13.8
13
65
17
61
50
1
10
37
1.47
9680--9741
27
2.3
27
88
0
88
48
1
8
41
1.42
9707--9869
44
3.7
44
90
1
238
52
1
11
34
1.48
9883--9960
32
2.4
32
89
0
111
25
17
21
34
1.96
10617--10648
16
2.0
16
93
0
55
34
12
15
37
1.85
14608--14679
26
2.7
27
86
2
92
38
27
16
16
1.90

Tables:   1

The End!