Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013241.1 Corchorus olitorius cultivar O-4 contig13274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22814

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
640--671
14
2.3
14
94
0
55
21
3
0
75
0.95
1325--1431
53
2.0
55
87
3
155
32
16
18
31
1.94
8399--8432
17
2.0
17
88
11
52
23
0
64
11
1.26
9142--9173
2
16.5
2
93
6
57
50
0
0
50
1.00
13983--14025
22
1.9
23
90
4
70
60
0
0
39
0.97
18980--19024
17
2.6
17
80
13
56
68
8
17
4
1.32
19764--19852
29
3.1
29
88
3
144
17
19
22
40
1.91
19764--19864
29
3.5
29
87
2
141
17
16
23
41
1.90

Tables:   1

The End!