Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013248.1 Corchorus olitorius cultivar O-4 contig13281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13153

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1461--1485
11
2.3
11
100
0
50
8
0
28
64
1.22
8160--8226
28
2.4
28
100
0
134
37
16
16
29
1.91
8188--8259
37
1.9
37
94
0
126
31
15
18
34
1.92
8193--8287
37
2.5
37
86
1
118
31
16
17
33
1.93
9272--9313
21
2.0
21
95
0
75
35
28
16
19
1.93
10278--10423
32
4.5
32
90
3
213
26
17
24
31
1.97
10792--10848
6
9.5
6
94
0
96
17
52
14
15
1.75
12800--12899
27
3.7
27
91
0
164
21
16
42
21
1.89

Tables:   1

The End!