Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013253.1 Corchorus olitorius cultivar O-4 contig13286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41288

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5960--5989
16
1.9
16
93
6
53
36
3
13
46
1.60
7581--7623
22
2.0
22
81
9
52
16
9
11
62
1.53
11421--11472
22
2.4
21
83
3
59
13
19
48
19
1.81
14688--14750
29
2.2
29
82
2
74
34
11
9
44
1.73
16513--16561
11
4.7
11
83
16
61
32
20
8
38
1.82
27967--28005
18
2.2
18
85
0
51
12
28
17
41
1.87
29484--29514
16
1.9
16
93
0
53
67
0
19
12
1.22

Tables:   1

The End!