Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013258.1 Corchorus olitorius cultivar O-4 contig13291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14078

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
634--697
22
3.2
22
60
35
54
21
17
12
48
1.80
634--712
37
2.1
37
100
0
158
21
15
13
49
1.79
1723--1875
57
2.7
57
81
1
191
39
20
25
14
1.90
2033--2502
60
8.1
60
91
6
759
46
22
17
12
1.83
2226--2319
30
3.2
30
63
19
79
44
27
14
12
1.82
2152--2490
167
2.0
169
96
1
628
46
23
16
13
1.83
2368--2398
12
2.6
12
94
0
53
45
19
25
9
1.81
2428--2458
12
2.6
12
94
0
53
45
19
25
9
1.81

Tables:   1

The End!