Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013273.1 Corchorus olitorius cultivar O-4 contig13306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49206

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9213--9382
91
1.9
91
81
2
207
42
15
8
33
1.76
15329--15481
77
2.0
78
92
3
256
55
0
10
33
1.39
33929--33972
13
3.4
12
84
9
52
0
34
2
63
1.07
33929--33972
6
6.8
6
80
14
52
0
34
2
63
1.07
34683--34722
20
2.0
20
95
0
71
35
12
15
37
1.85
34685--34740
20
2.7
20
86
5
67
37
14
16
32
1.88
34781--34869
23
3.9
23
78
17
80
42
4
14
38
1.66
34790--34895
23
4.7
22
81
9
90
41
7
11
39
1.69
34663--35065
22
18.4
22
72
14
142
36
11
15
36
1.83
34726--35199
22
21.7
22
70
7
178
37
11
16
35
1.84
35446--36301
435
2.0
433
87
5
1235
39
13
15
30
1.86
48715--48740
4
6.5
4
100
0
52
50
0
0
50
1.00

Tables:   1

The End!