Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013275.1 Corchorus olitorius cultivar O-4 contig13308, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12990

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2678--2754
30
2.5
31
91
6
115
35
28
10
25
1.89
3453--3495
22
1.9
23
95
4
79
37
13
23
25
1.92
7285--7384
49
2.0
49
94
0
173
45
31
4
20
1.69
8321--8420
49
2.0
49
96
0
182
44
31
5
20
1.73
11648--11693
19
2.3
20
81
3
58
63
6
19
10
1.48
11715--11780
20
3.3
20
82
0
87
62
12
13
12
1.56
11808--11849
20
2.1
20
95
0
75
59
9
19
11
1.59
11655--11904
88
2.9
87
83
3
306
51
16
19
12
1.76
11808--11867
20
3.0
20
87
0
66
58
10
18
13
1.62
11842--12337
48
10.4
48
90
0
733
42
20
22
14
1.88

Tables:   1

The End!