Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013276.1 Corchorus olitorius cultivar O-4 contig13309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6927

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1207--1538
40
8.7
39
74
14
210
36
13
21
28
1.91
1300--1708
147
2.8
147
84
1
507
37
11
20
30
1.88
1601--1950
40
8.8
40
85
6
435
38
11
20
30
1.87
1579--1950
80
4.7
79
86
4
491
38
11
20
30
1.87
1354--1869
147
3.4
147
81
6
491
38
11
19
30
1.87
1580--1957
120
3.2
118
86
5
517
37
10
20
30
1.87
1930--2034
39
2.8
37
79
2
120
39
10
23
26
1.87
2096--2744
138
4.6
138
87
7
890
34
16
20
27
1.95
3696--3721
13
2.0
13
100
0
52
7
15
7
69
1.35
5569--5593
13
1.9
13
100
0
50
32
16
28
24
1.96

Tables:   1

The End!