Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013286.1 Corchorus olitorius cultivar O-4 contig13319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33647

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6957--7049
42
2.2
42
88
1
134
41
17
4
36
1.69
7957--7993
2
18.0
2
94
5
65
48
0
2
48
1.15
13423--13459
19
1.9
19
94
0
65
51
5
8
35
1.55
14313--14348
19
1.9
18
88
5
54
41
2
22
33
1.68
21404--21451
26
1.9
25
91
8
80
33
18
12
35
1.89
30381--30416
19
1.9
18
88
5
54
27
22
8
41
1.82
31258--31292
18
2.0
18
88
5
54
37
11
5
45
1.64
31924--31980
30
1.9
29
89
10
89
61
5
12
21
1.50

Tables:   1

The End!