Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013291.1 Corchorus olitorius cultivar O-4 contig13324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30009

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1638--1668
3
10.7
3
93
6
55
0
32
0
67
0.91
14287--14648
109
3.3
109
88
3
523
29
8
22
40
1.82
21224--21300
29
2.6
30
81
6
102
31
27
11
29
1.92
21593--21669
30
2.5
31
83
6
104
29
11
27
31
1.92
23061--23102
19
2.2
19
100
0
84
52
7
4
35
1.50
23484--23607
57
2.2
58
91
1
196
35
19
29
16
1.93
26215--26258
15
3.0
14
83
9
52
40
0
0
59
0.98

Tables:   1

The End!