Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013293.1 Corchorus olitorius cultivar O-4 contig13326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35447

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
454--502
25
2.0
25
87
0
71
36
8
18
36
1.81
2625--2652
5
5.6
5
100
0
56
0
0
78
21
0.75
25238--25262
5
5.0
5
100
0
50
80
0
0
20
0.72
31678--31748
33
2.2
33
100
0
142
42
8
5
43
1.58
32104--32149
16
2.9
16
96
0
83
39
8
6
45
1.61
32158--33421
202
6.4
200
85
5
1610
33
19
13
33
1.90
32590--33358
385
2.0
385
90
2
1231
33
20
13
32
1.91

Tables:   1

The End!