Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013295.1 Corchorus olitorius cultivar O-4 contig13328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28723

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1415--1549
67
2.0
66
97
1
252
23
11
14
50
1.75
1638--1767
43
3.0
44
90
2
192
40
13
24
21
1.90
2138--2288
72
2.1
72
83
4
189
26
7
24
41
1.81
7485--7534
23
2.2
23
88
0
73
32
16
16
36
1.90
11853--11911
23
2.6
23
97
0
109
28
10
20
40
1.85
23796--24424
314
2.0
315
93
1
1064
43
16
14
25
1.85
26109--26164
29
1.9
29
82
7
69
39
32
1
26
1.67

Tables:   1

The End!