Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013296.1 Corchorus olitorius cultivar O-4 contig13329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22850

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1349--1387
2
19.5
2
100
0
78
51
0
0
48
1.00
2651--2698
19
2.5
19
100
0
96
16
22
14
45
1.84
3394--3421
2
14.0
2
100
0
56
50
0
0
50
1.00
15016--15064
17
2.9
17
82
8
57
38
2
4
55
1.31
21400--21472
29
2.5
30
84
2
103
42
13
24
19
1.87
21564--21625
30
2.1
30
87
3
90
40
3
16
40
1.64

Tables:   1

The End!