Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013297.1 Corchorus olitorius cultivar O-4 contig13330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34328

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
325--366
15
2.8
16
82
10
52
38
9
14
38
1.78
4264--4338
26
3.0
25
70
18
82
50
5
1
42
1.33
18743--18776
2
17.0
2
87
0
50
47
2
2
47
1.32
22618--22664
20
2.3
20
92
0
76
34
10
53
2
1.48
23012--23047
18
2.0
18
94
0
63
58
27
2
11
1.46
23336--23362
2
13.5
2
100
0
54
51
0
0
48
1.00
32984--33020
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!