Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013313.1 Corchorus olitorius cultivar O-4 contig13346, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65174

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
865--1083
109
2.0
108
95
0
393
46
11
15
26
1.80
8957--8994
19
2.0
19
89
0
58
18
5
13
63
1.48
17267--17378
56
2.0
57
85
3
156
38
22
1
37
1.65
17436--17518
42
2.0
42
97
0
157
30
7
15
46
1.73
18868--18901
2
17.0
2
100
0
68
50
0
0
50
1.00
23289--23340
3
17.3
3
100
0
104
67
0
0
32
0.91
23457--23701
127
2.0
122
86
7
345
14
22
17
45
1.85
25711--25748
11
3.5
11
89
10
51
39
0
2
57
1.12
28165--28190
13
2.0
13
100
0
52
53
30
0
15
1.42
50793--50818
10
2.6
10
100
0
52
76
7
0
15
0.99
51400--51638
128
1.9
128
90
3
383
47
7
10
35
1.65
62622--62658
19
1.9
19
88
0
56
32
16
13
37
1.87
62720--62754
18
1.9
18
100
0
70
40
22
5
31
1.78
63928--63990
31
2.0
31
100
0
126
42
22
0
34
1.54

Tables:   1

The End!