Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013316.1 Corchorus olitorius cultivar O-4 contig13349, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32709

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7956--7997
2
21.0
2
100
0
84
50
0
0
50
1.00
10482--10537
28
2.0
28
96
0
103
48
0
19
32
1.49
22327--22430
51
2.0
51
90
0
163
40
18
11
29
1.86
23939--24056
58
2.0
58
93
0
200
43
16
10
29
1.81
24386--24430
21
2.1
21
91
0
72
42
11
17
28
1.84
24407--24537
72
1.9
68
89
7
201
28
12
15
43
1.83
24612--24676
32
2.0
32
96
0
121
30
4
29
35
1.78
25550--25595
22
2.0
23
84
12
60
26
2
13
58
1.46
26771--26945
95
1.8
95
91
2
289
40
9
14
35
1.79
29039--29118
41
2.0
41
92
0
133
32
10
15
42
1.79
29117--29150
13
2.6
13
85
0
50
26
8
47
17
1.77

Tables:   1

The End!