Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013318.1 Corchorus olitorius cultivar O-4 contig13351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19028

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8759--8821
21
2.9
22
81
9
67
41
6
17
34
1.75
9335--9429
30
3.1
30
86
7
129
24
15
6
53
1.65
9374--9423
15
3.3
15
72
5
55
24
18
4
54
1.61
9334--9426
31
3.0
31
87
6
127
25
16
6
51
1.68
13886--14263
64
5.9
64
84
0
470
26
23
15
34
1.95
16131--16167
15
2.5
15
90
0
56
37
13
8
40
1.74

Tables:   1

The End!