Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013327.1 Corchorus olitorius cultivar O-4 contig13360, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47490

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8174--8246
28
2.6
28
100
0
146
28
6
10
53
1.61
8348--8394
23
2.0
23
95
0
85
38
17
6
38
1.75
9637--9686
16
3.3
15
81
13
59
2
16
2
80
0.91
9631--9686
7
7.7
7
86
4
67
3
14
1
80
0.93
9813--9915
31
3.4
31
70
23
92
25
16
26
32
1.96
18068--18108
21
2.0
21
90
9
66
51
7
7
34
1.58
20988--21068
42
1.9
42
85
5
110
13
45
22
18
1.84
21693--22326
319
2.0
319
98
0
1232
31
7
18
42
1.78
31909--31989
32
2.5
33
95
2
146
32
22
3
41
1.71
39286--39313
3
9.3
3
100
0
56
35
0
0
64
0.94
41169--41207
20
1.9
21
89
5
62
38
0
20
41
1.53
41251--41278
14
2.0
14
100
0
56
57
0
0
42
0.99

Tables:   1

The End!