Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013339.1 Corchorus olitorius cultivar O-4 contig13372, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39858

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2113--2161
14
3.6
14
72
5
55
61
2
8
28
1.36
1976--2255
151
1.9
150
92
0
470
51
3
7
37
1.45
4143--4220
30
2.7
29
84
4
86
30
28
5
35
1.79
9293--9944
328
2.0
329
99
0
1288
35
16
16
32
1.91
11823--11884
33
2.0
31
87
9
90
17
25
19
37
1.94
20893--20929
18
2.0
19
94
5
67
10
13
10
64
1.49
24457--24492
18
2.1
18
89
5
56
38
11
5
44
1.63
35500--35637
72
1.9
72
92
0
231
23
27
14
34
1.94
36853--36881
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!