Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013344.1 Corchorus olitorius cultivar O-4 contig13377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23682

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12408--12613
4
52.2
4
68
12
61
22
10
2
64
1.37
12412--12505
27
3.8
26
73
20
101
24
7
3
64
1.34
12421--12616
8
24.5
8
70
20
74
22
10
2
63
1.38
12409--12515
47
2.3
47
91
4
173
23
8
2
65
1.34
12439--12503
28
2.4
27
84
7
78
26
7
1
64
1.29
12609--12671
3
21.0
3
96
0
117
33
1
0
65
1.03
17924--17959
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!