Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013349.1 Corchorus olitorius cultivar O-4 contig13382, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20217

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4610--4659
18
2.8
17
79
8
55
72
0
26
2
0.96
5532--5574
21
2.0
21
86
8
61
16
2
16
65
1.38
9466--9535
21
3.3
21
71
11
52
47
8
17
27
1.76
10635--11447
280
3.0
273
87
5
1106
34
11
18
36
1.87
13745--13786
21
2.0
22
85
4
59
42
7
7
42
1.59
16937--17267
41
7.9
41
80
10
359
21
11
25
41
1.86
16937--17267
84
3.9
85
91
2
535
21
11
25
41
1.86
17794--17833
17
2.4
17
87
4
55
17
27
27
27
1.98
18473--18942
144
3.3
144
90
0
719
32
20
25
21
1.97
18473--18942
72
6.5
72
86
0
647
32
20
25
21
1.97

Tables:   1

The End!