Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013351.1 Corchorus olitorius cultivar O-4 contig13384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41398

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5137--5171
16
2.2
16
100
0
70
34
8
34
22
1.85
7585--7652
35
1.9
35
87
3
100
36
22
22
19
1.95
7527--7722
96
2.0
96
94
0
338
36
19
21
22
1.95
13778--13845
34
2.0
34
88
0
100
25
27
19
27
1.98
22573--22618
21
2.1
22
84
4
58
45
13
28
13
1.80
24877--24906
16
1.9
15
93
6
51
36
3
13
46
1.60
36703--36767
30
2.2
31
83
10
82
49
15
7
27
1.72
38561--38611
21
2.4
22
75
15
54
37
27
0
35
1.57
40693--40728
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!