Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013352.1 Corchorus olitorius cultivar O-4 contig13385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31930

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2337--2378
15
2.7
15
88
3
57
9
11
14
64
1.50
9596--9629
18
1.9
18
88
5
52
32
2
17
47
1.63
11117--11188
27
2.7
27
76
8
83
38
13
19
27
1.90
11604--11705
33
3.1
33
90
1
161
24
18
30
26
1.98
14821--14987
31
5.4
31
88
0
208
19
25
25
29
1.98
16492--16521
13
2.4
13
94
5
53
83
0
13
3
0.77
16492--16521
6
4.8
6
92
8
51
83
0
13
3
0.77
17078--17107
13
2.3
13
94
0
51
26
33
0
40
1.57
23993--24116
45
2.7
46
89
2
187
26
10
21
41
1.86
26661--26713
23
2.3
23
93
3
88
41
3
7
47
1.50

Tables:   1

The End!