Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013354.1 Corchorus olitorius cultivar O-4 contig13387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46367

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14780--14813
12
2.8
12
86
4
50
0
8
8
82
0.85
25306--25341
19
1.9
18
88
5
54
41
2
22
33
1.68
30563--30597
17
2.1
17
88
0
52
37
22
8
31
1.85
31083--31363
41
6.7
41
73
12
212
40
25
9
24
1.85
31083--31373
85
3.4
85
86
4
399
39
24
10
25
1.87
40723--40803
30
2.5
33
76
17
98
44
4
1
49
1.32
40745--40810
30
2.2
29
81
10
71
50
4
0
45
1.22
40864--40926
22
2.9
21
81
9
72
52
20
12
14
1.74
40864--40915
11
4.7
11
81
6
61
55
21
11
11
1.66
44558--44603
20
2.1
23
84
11
62
50
26
13
10
1.74
45895--45932
9
4.3
9
90
3
60
47
0
18
34
1.49

Tables:   1

The End!