Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013357.1 Corchorus olitorius cultivar O-4 contig13390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23145

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1686--1816
27
4.9
27
95
0
217
35
13
25
24
1.93
1850--1912
27
2.3
28
81
8
76
34
12
23
28
1.92
1758--1999
107
2.3
107
86
2
337
39
11
21
27
1.88
1889--1989
41
2.5
39
84
4
130
37
11
20
29
1.89
1832--1960
68
1.9
66
88
3
195
37
12
21
28
1.90
1898--1999
39
2.5
41
85
3
136
40
11
19
28
1.87
2182--2931
145
5.2
145
91
2
1229
34
16
20
29
1.94
2182--2931
289
2.6
287
93
2
1286
34
16
20
29
1.94
3904--3948
5
9.0
5
92
0
63
0
33
0
66
0.92
3905--3949
15
3.0
15
93
0
72
0
31
0
68
0.89
11741--11785
23
2.0
23
83
16
58
6
6
13
73
1.24
21213--21242
1
30.0
1
100
0
60
100
0
0
0
0.00

Tables:   1

The End!