Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013361.1 Corchorus olitorius cultivar O-4 contig13394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54440

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4027--4131
33
3.2
31
83
11
120
43
23
7
24
1.80
7550--7579
15
2.0
15
93
0
51
43
26
10
20
1.83
10707--10738
15
2.1
15
100
0
64
21
31
15
31
1.95
14667--14716
26
1.9
26
95
0
91
14
2
38
46
1.56
25579--25648
30
2.3
30
83
9
81
52
18
4
24
1.63
27838--27898
25
2.5
24
76
5
68
54
13
13
19
1.71
29413--29466
19
2.6
21
77
19
60
38
1
20
38
1.63
33653--33682
11
2.7
11
100
0
60
53
20
26
0
1.46
35254--35497
122
2.0
122
98
0
470
28
15
10
45
1.79
41509--41547
18
2.2
18
90
0
60
48
5
10
35
1.59
46208--46245
18
2.1
19
90
5
60
28
13
39
18
1.88
48640--48681
21
2.0
21
86
4
59
23
9
35
30
1.87
49838--49885
21
2.2
21
85
3
60
68
4
12
14
1.34

Tables:   1

The End!