Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013362.1 Corchorus olitorius cultivar O-4 contig13395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18885

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6735--6781
26
1.9
23
87
12
67
40
4
27
27
1.75
8003--8050
24
2.0
25
87
4
71
54
14
18
12
1.71
10074--10299
54
4.2
53
76
10
226
24
18
7
50
1.72
10277--10495
22
10.0
22
81
3
228
14
23
5
57
1.57
10340--10501
87
1.9
88
84
3
220
14
25
3
56
1.55
10507--10601
28
3.3
28
66
11
84
26
18
5
49
1.69
10473--10607
58
2.3
59
94
1
236
22
17
5
54
1.62
10586--10651
22
3.0
22
79
0
78
13
21
6
59
1.56
10533--10756
102
2.2
103
91
2
362
19
20
5
54
1.64
10694--10778
22
3.9
22
92
0
143
14
22
4
58
1.54
10711--10804
12
8.2
12
64
23
51
12
22
4
60
1.49

Tables:   1

The End!