Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013367.1 Corchorus olitorius cultivar O-4 contig13400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17372

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
437--499
33
1.9
33
96
0
117
11
31
14
42
1.80
1709--1741
2
17.0
2
93
6
59
51
0
0
48
1.00
3367--3421
23
2.4
23
96
0
101
40
5
16
38
1.72
3547--3578
15
2.1
15
100
0
64
46
0
18
34
1.49
8013--8127
30
3.8
30
84
7
144
34
26
22
15
1.94
7976--8069
50
1.9
48
85
8
127
38
22
21
18
1.93
8013--8127
60
1.9
61
85
5
162
34
26
22
15
1.94
8618--8665
22
2.2
23
78
17
57
45
27
6
20
1.75
13681--13794
60
1.9
60
83
8
142
39
14
14
32
1.85
13875--13940
29
2.3
29
86
0
96
31
16
13
37
1.88
17304--17368
2
32.5
2
100
0
130
49
0
50
0
1.00

Tables:   1

The End!