Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013368.1 Corchorus olitorius cultivar O-4 contig13401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8518

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1417--1672
135
1.9
135
88
0
386
36
17
16
29
1.92
2112--2136
9
2.8
9
100
0
50
12
40
12
36
1.79
4850--5010
78
2.1
78
96
0
295
50
1
14
33
1.50
5101--5137
6
6.7
6
82
17
53
48
0
16
35
1.46
5101--5130
10
2.9
10
95
5
51
50
0
16
33
1.46
5103--5136
16
2.2
15
94
5
59
50
0
17
32
1.47
6219--6316
44
2.2
44
96
1
178
62
5
7
25
1.42
7054--7265
112
1.9
112
84
5
286
41
12
16
29
1.85
7909--7934
4
6.5
4
100
0
52
50
23
0
26
1.50
7932--7956
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!