Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013378.1 Corchorus olitorius cultivar O-4 contig13411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23834

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1243--1277
16
2.2
16
100
0
70
5
17
5
71
1.25
1369--1419
19
2.7
19
77
14
61
50
1
0
47
1.12
14097--14167
25
2.8
26
89
6
119
30
16
43
8
1.78
17028--17079
11
5.1
10
77
17
54
40
1
19
38
1.63
17039--17074
19
1.9
18
88
5
54
41
0
22
36
1.54
23207--23421
4
55.2
4
69
16
123
26
6
0
66
1.20
23215--23460
8
30.8
8
68
23
85
26
8
1
63
1.31
23212--23404
45
4.3
44
89
6
284
27
7
0
64
1.23
23212--23421
88
2.4
90
87
8
299
27
6
0
65
1.21
23432--23472
16
2.5
17
84
7
50
21
19
2
56
1.54

Tables:   1

The End!