Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013381.1 Corchorus olitorius cultivar O-4 contig13414, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26146

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1376--1408
16
2.1
16
100
0
66
30
27
6
36
1.81
1498--1563
32
2.1
32
100
0
132
34
15
18
31
1.92
2926--2964
19
2.1
19
100
0
78
23
20
20
35
1.96
9460--9502
14
2.9
14
82
6
50
79
4
13
2
1.00
17586--17627
6
7.0
6
78
10
50
0
16
2
80
0.81
21984--22009
1
26.0
1
100
0
52
0
0
0
100
0.00

Tables:   1

The End!