Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013382.1 Corchorus olitorius cultivar O-4 contig13415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57959

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3095--3152
21
2.9
19
79
5
62
29
22
12
36
1.90
11043--11067
13
1.9
13
100
0
50
40
24
24
12
1.88
12122--12539
210
2.0
209
98
1
811
41
18
15
24
1.89
19501--19786
144
2.0
139
94
3
500
22
22
26
28
1.99
31111--31145
1
35.0
1
94
0
61
97
2
0
0
0.19
50710--50743
2
17.0
2
100
0
68
50
0
0
50
1.00
52343--52381
14
2.7
14
84
4
51
61
10
7
20
1.52
55739--55810
35
2.1
35
86
0
99
27
1
34
36
1.66
56563--56699
22
6.3
22
71
12
88
40
9
13
37
1.77
57911--57944
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!