Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013392.1 Corchorus olitorius cultivar O-4 contig13425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35347

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5426--5461
3
12.0
3
100
0
72
33
66
0
0
0.92
5597--5652
6
9.3
6
78
7
51
26
35
19
17
1.94
13280--13704
121
3.5
120
87
5
545
39
14
8
36
1.78
17646--17676
13
2.3
14
94
5
55
0
0
16
83
0.64
18812--18849
18
2.2
19
86
13
55
15
2
7
73
1.17
19727--19753
4
6.8
4
100
0
54
77
0
22
0
0.76
19912--19938
11
2.5
11
100
0
54
70
7
7
14
1.32
32331--32416
42
2.0
42
100
0
172
32
23
2
41
1.67

Tables:   1

The End!