Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013395.1 Corchorus olitorius cultivar O-4 contig13428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46691

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1053--1086
14
2.4
14
85
0
50
29
2
8
58
1.43
1111--1168
29
2.0
28
84
15
75
32
8
22
36
1.85
1613--1673
27
2.3
27
91
0
95
37
21
14
26
1.92
21364--21398
11
3.2
11
83
0
52
77
17
5
0
0.96
26661--26690
12
2.5
12
88
0
51
56
33
10
0
1.32
37887--37942
28
2.1
28
90
6
89
46
10
10
32
1.73
44433--44469
18
2.0
20
89
10
60
37
5
29
27
1.79

Tables:   1

The End!