Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013401.1 Corchorus olitorius cultivar O-4 contig13434, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36364

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--39
2
17.5
2
100
0
70
48
0
0
51
1.00
2674--2727
19
2.6
21
77
19
60
38
18
3
38
1.69
8174--8364
97
2.0
97
90
0
301
23
35
17
23
1.95
26536--26574
18
2.1
18
85
4
51
25
15
15
43
1.86
26665--26713
21
2.3
20
79
6
53
28
6
28
36
1.81
29015--29041
12
2.2
12
100
0
54
0
33
44
22
1.53
32442--32600
28
5.5
28
78
10
153
16
15
25
41
1.88

Tables:   1

The End!