Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013414.1 Corchorus olitorius cultivar O-4 contig13447, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27096

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7222--7277
15
3.7
15
92
0
85
16
23
16
44
1.86
7222--7286
30
2.2
30
85
0
85
15
24
16
43
1.87
7235--7286
15
3.5
15
94
0
86
13
25
19
42
1.87
8110--8251
49
3.0
47
80
9
160
50
4
15
28
1.65
9530--9558
9
3.3
9
95
4
51
37
17
0
44
1.49
11032--11109
39
2.0
39
100
0
156
35
7
12
43
1.72
15564--15591
2
14.0
2
100
0
56
50
0
0
50
1.00
17308--17349
3
14.0
3
100
0
84
66
0
0
33
0.92
18444--18507
25
2.6
25
85
9
78
12
42
18
26
1.86
18574--18618
18
2.5
18
96
0
81
26
37
20
15
1.92
25720--25755
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!