Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013417.1 Corchorus olitorius cultivar O-4 contig13450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22178

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3128--3204
26
2.9
26
86
5
93
37
27
14
20
1.91
3565--3799
35
6.8
34
82
7
278
28
23
18
29
1.98
3567--3799
70
3.4
70
90
3
348
28
23
18
28
1.98
3922--4089
69
2.4
69
89
0
246
29
16
27
26
1.97
7902--8016
58
2.0
58
98
0
221
20
23
35
20
1.96
12172--12248
26
2.9
26
86
5
93
38
27
12
20
1.89
12603--12689
32
2.6
32
83
5
102
32
18
1
48
1.56
12717--12770
17
3.2
17
77
15
67
18
20
0
61
1.35
12797--12861
33
2.0
32
87
3
94
29
23
3
44
1.68
12886--12964
24
3.2
25
74
12
81
22
17
1
58
1.46
12609--13043
158
2.7
160
85
7
562
28
18
2
50
1.60
12911--13100
33
6.0
31
71
17
142
30
18
2
49
1.59
12931--13097
89
1.9
91
93
2
293
30
18
1
49
1.58
13155--13245
26
3.3
26
72
19
94
27
19
3
49
1.64
13163--13252
29
3.1
29
70
20
98
30
18
3
47
1.65
13147--13278
57
2.3
57
98
0
255
28
19
3
48
1.66

Tables:   1

The End!