Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013418.1 Corchorus olitorius cultivar O-4 contig13451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7431

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
938--1138
34
5.5
37
89
6
245
39
16
15
28
1.89
2288--2325
14
2.8
14
80
19
53
0
42
2
55
1.14
2512--2541
16
1.9
15
93
6
51
40
36
3
20
1.69
2500--2541
15
2.8
15
82
17
52
35
40
2
21
1.66
5362--5417
27
2.1
27
100
0
112
53
14
10
21
1.70
5353--5431
27
2.7
30
82
15
110
53
12
11
22
1.71

Tables:   1

The End!