Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013419.1 Corchorus olitorius cultivar O-4 contig13452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41806

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7090--7127
19
2.1
18
85
9
51
23
42
23
10
1.85
11115--11250
49
2.9
47
84
8
168
49
5
16
28
1.69
12537--12574
9
4.3
9
90
3
60
31
23
0
44
1.54
12537--12574
18
2.2
17
95
4
67
31
23
0
44
1.54
28005--28042
11
3.5
11
85
7
60
2
21
60
15
1.47
28810--28882
35
2.1
35
97
0
137
27
20
17
34
1.95
30257--30600
178
1.9
177
85
5
471
33
13
16
36
1.88
33520--33549
15
1.9
16
93
6
53
80
10
10
0
0.92
33615--33656
20
2.1
20
100
0
84
40
9
9
40
1.70

Tables:   1

The End!