Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013430.1 Corchorus olitorius cultivar O-4 contig13463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20140

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--1215
19
1.9
19
94
0
65
48
5
13
32
1.65
2503--2550
24
2.0
25
83
4
62
16
6
6
70
1.28
6147--6271
42
2.9
42
75
9
126
27
28
8
36
1.86
6162--6273
21
5.2
21
72
6
89
26
26
8
38
1.84
6162--6273
45
2.6
44
84
4
147
26
26
8
38
1.84
7461--7492
15
2.1
16
88
11
50
46
0
0
53
1.00
7581--7641
31
2.0
30
84
6
79
36
19
16
27
1.93
7586--7652
29
2.2
31
82
10
77
38
23
14
22
1.92
8341--8382
12
3.6
11
81
18
50
83
2
11
2
0.84
9520--9629
53
2.1
53
96
0
202
24
7
18
50
1.72
14833--14867
15
2.2
16
90
5
54
82
2
14
0
0.77
15501--15543
16
2.7
15
82
10
50
0
16
13
69
1.19
17920--17979
24
2.5
24
94
0
102
31
11
3
53
1.53
20103--20140
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!