Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013434.1 Corchorus olitorius cultivar O-4 contig13467, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8733

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
992--1024
17
1.9
17
100
0
66
54
3
30
12
1.52
4824--4870
16
2.9
16
84
6
51
76
0
21
2
0.89
4816--4870
21
2.5
22
82
11
60
74
0
23
1
0.91
5787--5816
2
15.0
2
100
0
60
50
0
0
50
1.00
5986--6023
9
4.3
9
90
3
60
47
0
18
34
1.49
7313--7443
49
2.7
48
80
6
149
29
16
6
48
1.71
8268--8304
15
2.5
15
90
0
56
40
13
27
18
1.88

Tables:   1

The End!