Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013435.1 Corchorus olitorius cultivar O-4 contig13468, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53213

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9539--9690
69
2.2
70
90
1
234
19
28
24
27
1.99
14133--14186
28
2.0
28
85
7
76
18
14
25
40
1.89
14140--14214
28
2.8
28
88
8
102
20
16
22
41
1.90
19595--19644
7
7.7
7
78
14
54
40
0
0
60
0.97
19594--19650
16
3.6
15
86
9
78
40
0
0
59
0.97
19596--19674
36
2.2
37
81
2
97
40
1
2
55
1.21
23857--23982
62
2.0
62
100
0
252
37
12
20
29
1.90
25039--25085
23
2.0
23
84
8
60
57
0
2
40
1.11
47492--47525
16
2.1
16
88
0
50
8
11
5
73
1.24
48066--48285
41
5.4
41
71
8
144
48
14
14
22
1.80
49308--49372
28
2.3
29
86
2
87
18
15
24
41
1.89
49314--49380
29
2.4
28
84
2
89
20
14
19
44
1.86
49581--49722
60
2.4
60
98
0
275
29
16
9
44
1.79

Tables:   1

The End!