Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013441.1 Corchorus olitorius cultivar O-4 contig13474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30182

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6553--6674
61
2.0
61
82
4
147
26
1
20
51
1.56
7315--7365
24
2.1
24
92
0
84
39
3
35
21
1.72
10354--10388
18
1.9
18
94
0
61
20
11
20
48
1.79
14147--14172
8
3.2
8
100
0
52
11
11
50
26
1.73
18479--18526
17
2.8
17
90
0
69
20
27
20
31
1.98
19186--19261
38
2.0
38
100
0
152
28
10
23
36
1.88
21578--21621
22
2.0
22
95
0
79
18
20
27
34
1.96
26406--26507
28
3.6
27
84
9
107
20
16
22
40
1.91
26434--26539
28
3.9
27
80
6
115
16
16
25
40
1.90
26633--26681
21
2.4
20
83
6
62
24
16
8
51
1.71

Tables:   1

The End!