Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013446.1 Corchorus olitorius cultivar O-4 contig13479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3445

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
171--385
22
9.7
22
68
12
111
35
13
10
40
1.79
223--381
68
2.4
66
82
8
171
34
13
11
39
1.82
235--384
44
3.4
44
76
1
129
34
14
12
39
1.82
1638--2039
170
2.4
165
76
8
398
31
16
17
34
1.92
1682--1994
170
1.8
171
82
6
402
31
17
17
33
1.94
2127--2248
22
5.6
22
75
9
99
40
15
11
31
1.83
2121--2270
66
2.3
64
75
11
142
39
14
13
33
1.84
2370--2524
22
6.7
22
68
20
59
34
21
9
35
1.85
2551--2654
22
4.7
22
78
11
97
35
12
13
38
1.83
2550--2654
44
2.4
44
86
0
147
35
13
13
38
1.84

Tables:   1

The End!